HL_4WPO_053

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUAAAAGGUAACG

Length

13 nucleotides

Bulged bases

4WPO|1|AA|A|2280, 4WPO|1|AA|C|2287

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_053 not in the Motif Atlas

Homologous match to HL_7RQB_054

Geometric discrepancy: 0.0432

The information below is about HL_7RQB_054

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_19870.6

Basepair signature

cWW-tSH-tHH-tWW-F-F-F

Number of instances in this motif group

7

Unit IDs

4WPO|1|AA|C|2276
4WPO|1|AA|U|2277
4WPO|1|AA|A|2278
4WPO|1|AA|A|2279
4WPO|1|AA|A|2280
4WPO|1|AA|A|2281
4WPO|1|AA|G|2282
4WPO|1|AA|G|2283
4WPO|1|AA|U|2284
4WPO|1|AA|A|2285
4WPO|1|AA|A|2286
4WPO|1|AA|C|2287
4WPO|1|AA|G|2288

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A0

50S ribosomal protein L27

Chain AQ

50S ribosomal protein L16