HL_4WPO_061

3D structure

PDB id

4WPO (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the pre-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WPO_061 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.0941

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4WPO|1|AA|C|2563
4WPO|1|AA|U|2564
4WPO|1|AA|G|2565
4WPO|1|AA|U|2566
4WPO|1|AA|U|2567
4WPO|1|AA|C|2568
4WPO|1|AA|G|2569

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain BW

Transfer RNA; tRNA