HL_4WQ1_076

3D structure

PDB id

4WQ1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Tyr and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.1 Å

Loop

Sequence

UGAUGAG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQ1_076 not in the Motif Atlas

Homologous match to HL_9DFE_041

Geometric discrepancy: 0.4521

The information below is about HL_9DFE_041

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4WQ1|1|14|U|1727
4WQ1|1|14|G|1728
4WQ1|1|14|A|1729
4WQ1|1|14|U|1730
4WQ1|1|14|G|1731
4WQ1|1|14|A|1732
4WQ1|1|14|G|1733

Current chains

Chain 14

23S ribosomal RNA

Nearby chains