HL_9DFE_041
3D structure
- PDB id
- 9DFE (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with lasso peptide lariocidin and protein Y at 2.60A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.6 Å
Loop
- Sequence
- UGAUGAG
- Length
- 7 nucleotides
- Bulged bases
- 9DFE|1|1A|U|1739
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- GNRA
- Broad Annotation
- No text annotation
- Motif group
- HL_37824.7
- Basepair signature
- cWW-F-F-F-F
- Number of instances in this motif group
- 349
Unit IDs
9DFE|1|1A|U|1720
9DFE|1|1A|G|1721
9DFE|1|1A|A|1722
9DFE|1|1A|U|1739
9DFE|1|1A|G|1740
9DFE|1|1A|A|1741
9DFE|1|1A|G|1742
Current chains
- Chain 1A
- 23S Ribosomal RNA
Nearby chains
No other chains within 10ÅColoring options: