HL_4WQF_158

3D structure

PDB id

4WQF (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G and fusidic acid in the post-translocational state

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUAACUAUAAC

Length

11 nucleotides

Bulged bases

4WQF|1|CA|A|1913

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQF_158 not in the Motif Atlas

Geometric match to HL_5TBW_049

Geometric discrepancy: 0.1862

The information below is about HL_5TBW_049

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_84702.1

Basepair signature

cWW-F-F-tHW-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4WQF|1|CA|G|1910
4WQF|1|CA|U|1911
4WQF|1|CA|A|1912
4WQF|1|CA|A|1913
4WQF|1|CA|C|1914
4WQF|1|CA|U|1915
4WQF|1|CA|A|1916
4WQF|1|CA|U|1917
4WQF|1|CA|A|1918
4WQF|1|CA|A|1919
4WQF|1|CA|C|1920

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain DA

Small subunit ribosomal RNA; SSU rRNA

Chain DW

Transfer RNA; tRNA

Chain DZ

50S ribosomal protein L9,Elongation factor G