HL_4WQR_145

3D structure

PDB id

4WQR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.

Experimental method

X-RAY DIFFRACTION

Resolution

3.15 Å

Loop

Sequence

UUGGGAAG

Length

8 nucleotides

Bulged bases

4WQR|1|1H|A|311

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQR_145 not in the Motif Atlas

Homologous match to HL_7RQB_010

Geometric discrepancy: 0.09

The information below is about HL_7RQB_010

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_41998.1

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

69

Unit IDs

4WQR|1|1H|U|305
4WQR|1|1H|U|306
4WQR|1|1H|G|307
4WQR|1|1H|G|308
4WQR|1|1H|G|309
4WQR|1|1H|A|310
4WQR|1|1H|A|311
4WQR|1|1H|G|312

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain G8

50S ribosomal protein L24