HL_4WQR_218
3D structure
- PDB id
- 4WQR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with C-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.15 Å
Loop
- Sequence
- GG(OMC)UCAUAACC
- Length
- 11 nucleotides
- Bulged bases
- 4WQR|1|2L|U|34
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQR_218 not in the Motif Atlas
- Homologous match to HL_5IB8_208
- Geometric discrepancy: 0.2878
- The information below is about HL_5IB8_208
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_36684.4
- Basepair signature
- cWW-F-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 7
Unit IDs
4WQR|1|2L|G|31
4WQR|1|2L|G|32
4WQR|1|2L|OMC|33
4WQR|1|2L|U|34
4WQR|1|2L|C|35
4WQR|1|2L|A|36
4WQR|1|2L|U|37
4WQR|1|2L|A|38
4WQR|1|2L|A|39
4WQR|1|2L|C|40
4WQR|1|2L|C|41
Current chains
- Chain 2L
- tRNA-fMet
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3L
- Transfer RNA; tRNA
- Chain 4A
- 30S ribosomal protein S13
- Chain 4L
- mRNA
- Chain 82
- 30S ribosomal protein S9
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