HL_4WQU_021
3D structure
- PDB id
- 4WQU (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.8 Å
Loop
- Sequence
- GGUGAGAC
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WQU_021 not in the Motif Atlas
- Homologous match to HL_7RQB_022
- Geometric discrepancy: 0.093
- The information below is about HL_7RQB_022
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_84085.2
- Basepair signature
- cWW-tSH-F-F-F-F
- Number of instances in this motif group
- 15
Unit IDs
4WQU|1|AA|G|759
4WQU|1|AA|G|760
4WQU|1|AA|U|761
4WQU|1|AA|G|762
4WQU|1|AA|A|763
4WQU|1|AA|G|764
4WQU|1|AA|A|765
4WQU|1|AA|C|766
Current chains
- Chain AA
- 23S Ribosomal RNA
Nearby chains
- Chain AD
- 50S ribosomal protein L2
- Chain BA
- Small subunit ribosomal RNA; SSU rRNA
- Chain BO
- 30S ribosomal protein S15
- Chain BQ
- 30S ribosomal protein S17
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