HL_4WQU_075

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

4WQU|1|BA|U|202, 4WQU|1|BA|U|204

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_075 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.2956

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

4WQU|1|BA|G|200
4WQU|1|BA|C|201
4WQU|1|BA|U|202
4WQU|1|BA|U|203
4WQU|1|BA|U|204
4WQU|1|BA|G|216
4WQU|1|BA|C|217

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains