HL_4WQU_160

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUCCGG

Length

6 nucleotides

Bulged bases

4WQU|1|CA|C|2145

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_160 not in the Motif Atlas

Homologous match to HL_3U4M_001

Geometric discrepancy: 0.4686

The information below is about HL_3U4M_001

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4WQU|1|CA|C|2143
4WQU|1|CA|U|2144
4WQU|1|CA|C|2145
4WQU|1|CA|C|2146
4WQU|1|CA|G|2147
4WQU|1|CA|G|2148

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains