HL_4WQU_194

3D structure

PDB id

4WQU (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G trapped by the antibiotic dityromycin

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GCUCAAC

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQU_194 not in the Motif Atlas

Homologous match to HL_4LFB_014

Geometric discrepancy: 0.1216

The information below is about HL_4LFB_014

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_10453.3

Basepair signature

cWW-F-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WQU|1|DA|G|617
4WQU|1|DA|C|618
4WQU|1|DA|U|619
4WQU|1|DA|C|620
4WQU|1|DA|A|621
4WQU|1|DA|A|622
4WQU|1|DA|C|623

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DD

30S ribosomal protein S4

Chain DP

30S ribosomal protein S16