HL_4WQY_012

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

4WQY|1|AA|G|413

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_012 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.0569

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4WQY|1|AA|G|409
4WQY|1|AA|U|410
4WQY|1|AA|U|411
4WQY|1|AA|C|412
4WQY|1|AA|G|413
4WQY|1|AA|U|414
4WQY|1|AA|G|415
4WQY|1|AA|G|416
4WQY|1|AA|A|417
4WQY|1|AA|G|418
4WQY|1|AA|C|419

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain A1

50S ribosomal protein L28

Chain AP

50S ribosomal protein L15