HL_4WQY_068

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4WQY|1|AA|A|2830

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_068 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0758

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WQY|1|AA|G|2829
4WQY|1|AA|A|2830
4WQY|1|AA|A|2831
4WQY|1|AA|G|2832
4WQY|1|AA|A|2833
4WQY|1|AA|C|2834
4WQY|1|AA|C|2835
4WQY|1|AA|A|2836
4WQY|1|AA|C|2837

Current chains

Chain AA

23S Ribosomal RNA

Nearby chains

Chain AE

50S ribosomal protein L3

Chain AR

50S ribosomal protein L17

Chain AT

50S ribosomal protein L19