HL_4WQY_082

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WQY|1|BA|U|421

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_082 not in the Motif Atlas

Homologous match to HL_4LFB_011

Geometric discrepancy: 0.1127

The information below is about HL_4LFB_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_61337.1

Basepair signature

cWW-tSW-F

Number of instances in this motif group

49

Unit IDs

4WQY|1|BA|C|419
4WQY|1|BA|U|420
4WQY|1|BA|U|421
4WQY|1|BA|C|422
4WQY|1|BA|G|423
4WQY|1|BA|G|424

Current chains

Chain BA

16S Ribosomal RNA

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BD

30S ribosomal protein S4