HL_4WQY_161

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CUGGGGCGG

Length

9 nucleotides

Bulged bases

4WQY|1|CA|G|2250

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_161 not in the Motif Atlas

Homologous match to HL_7RQB_053

Geometric discrepancy: 0.0978

The information below is about HL_7RQB_053

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WQY|1|CA|C|2248
4WQY|1|CA|U|2249
4WQY|1|CA|G|2250
4WQY|1|CA|G|2251
4WQY|1|CA|G|2252
4WQY|1|CA|G|2253
4WQY|1|CA|C|2254
4WQY|1|CA|G|2255
4WQY|1|CA|G|2256

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain C0

50S ribosomal protein L27

Chain CQ

50S ribosomal protein L16

Chain DX

Transfer RNA; tRNA