HL_4WQY_163

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGACGGAAAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_163 not in the Motif Atlas

Homologous match to HL_7RQB_055

Geometric discrepancy: 0.1171

The information below is about HL_7RQB_055

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_11805.3

Basepair signature

cWW-F-F-F-F-F-F-F-F-F

Number of instances in this motif group

3

Unit IDs

4WQY|1|CA|G|2303
4WQY|1|CA|G|2304
4WQY|1|CA|A|2305
4WQY|1|CA|C|2306
4WQY|1|CA|G|2307
4WQY|1|CA|G|2308
4WQY|1|CA|A|2309
4WQY|1|CA|A|2310
4WQY|1|CA|A|2311
4WQY|1|CA|U|2312
4WQY|1|CA|C|2313

Current chains

Chain CA

23S Ribosomal RNA

Nearby chains

Chain CB

5S ribosomal RNA; 5S rRNA

Chain CG

50S ribosomal protein L5