HL_4WQY_182

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_182 not in the Motif Atlas

Homologous match to HL_4LFB_003

Geometric discrepancy: 0.1732

The information below is about HL_4LFB_003

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.4

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

399

Unit IDs

4WQY|1|DA|G|158
4WQY|1|DA|G|159
4WQY|1|DA|A|160
4WQY|1|DA|A|161
4WQY|1|DA|A|162
4WQY|1|DA|C|163

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain CT

50S ribosomal protein L19

Chain DT

30S ribosomal protein S20