HL_4WQY_187

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

CACUGAGACACGGG

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_187 not in the Motif Atlas

Homologous match to HL_4LFB_008

Geometric discrepancy: 0.0997

The information below is about HL_4LFB_008

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_39665.1

Basepair signature

cWW-cWW-tWH-F-tWH-F-F-F-F-F

Number of instances in this motif group

2

Unit IDs

4WQY|1|DA|C|320
4WQY|1|DA|A|321
4WQY|1|DA|C|322
4WQY|1|DA|U|323
4WQY|1|DA|G|324
4WQY|1|DA|A|325
4WQY|1|DA|G|326
4WQY|1|DA|A|327
4WQY|1|DA|C|328
4WQY|1|DA|A|329
4WQY|1|DA|C|330
4WQY|1|DA|G|331
4WQY|1|DA|G|332
4WQY|1|DA|G|333

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DP

30S ribosomal protein S16

Chain DT

30S ribosomal protein S20