HL_4WQY_197

3D structure

PDB id

4WQY (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the Thermus thermophilus 70S ribosome in complex with elongation factor G in the post-translocational state (without fusitic acid)

Experimental method

X-RAY DIFFRACTION

Resolution

2.8 Å

Loop

Sequence

GGUCUCC

Length

7 nucleotides

Bulged bases

4WQY|1|DA|U|839

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WQY_197 not in the Motif Atlas

Homologous match to HL_5J7L_018

Geometric discrepancy: 0.3934

The information below is about HL_5J7L_018

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_37344.1

Basepair signature

cWW-F-F

Number of instances in this motif group

2

Unit IDs

4WQY|1|DA|G|837
4WQY|1|DA|G|838
4WQY|1|DA|U|839
4WQY|1|DA|C|840
4WQY|1|DA|U|841
4WQY|1|DA|C|848
4WQY|1|DA|C|849

Current chains

Chain DA

16S Ribosomal RNA

Nearby chains

Chain DB

30S ribosomal protein S2

Chain DR

30S ribosomal protein S18