HL_4WR6_221
3D structure
- PDB id
- 4WR6 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- G(5MU)(PSU)CAAAUC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Modified nucleotides: 5MU, PSU
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WR6_221 not in the Motif Atlas
- Homologous match to HL_5E81_213
- Geometric discrepancy: 0.1505
- The information below is about HL_5E81_213
- Detailed Annotation
- T-loop with 2 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_28252.8
- Basepair signature
- cWW-tWH-F-F-F-F-F
- Number of instances in this motif group
- 140
Unit IDs
4WR6|1|2L|G|54||||P_1
4WR6|1|2L|5MU|55||||P_1
4WR6|1|2L|PSU|56||||P_1
4WR6|1|2L|C|57||||P_1
4WR6|1|2L|A|58||||P_1
4WR6|1|2L|A|59||||P_1
4WR6|1|2L|A|60||||P_1
4WR6|1|2L|U|61||||P_1
4WR6|1|2L|C|62||||P_1
Current chains
- Chain 2L
- tRNA-fMet
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 45
- 50S ribosomal protein L16
- Chain 49
- 50S ribosomal protein L5
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