HL_4WRA_003
3D structure
- PDB id
- 4WRA (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Tyr and mRNA with A-A mismatch in the first position in the A-site and with antibiotic paromomycin.
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- GGGAAACU
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WRA_003 not in the Motif Atlas
- Geometric match to HL_6CZR_215
- Geometric discrepancy: 0.3052
- The information below is about HL_6CZR_215
- Detailed Annotation
- GNRA with extra near cWW
- Broad Annotation
- GNRA with extra near cWW
- Motif group
- HL_82182.1
- Basepair signature
- cWW-F-F-F-F-F-F
- Number of instances in this motif group
- 21
Unit IDs
4WRA|1|13|G|157
4WRA|1|13|G|158
4WRA|1|13|G|159
4WRA|1|13|A|160
4WRA|1|13|A|161
4WRA|1|13|A|162
4WRA|1|13|C|163
4WRA|1|13|U|164
Current chains
- Chain 13
- 16S ribosomal RNA
Nearby chains
- Chain B8
- 50S ribosomal protein L19
- Chain BI
- 30S ribosomal protein S20
Coloring options: