HL_4WSM_082

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

GUGAAGAUGC

Length

10 nucleotides

Bulged bases

4WSM|1|14|A|2030, 4WSM|1|14|A|2031, 4WSM|1|14|G|2032

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WSM_082 not in the Motif Atlas

Homologous match to HL_7RQB_050

Geometric discrepancy: 0.1069

The information below is about HL_7RQB_050

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_90642.6

Basepair signature

cWW-tWH-F-F-F

Number of instances in this motif group

6

Unit IDs

4WSM|1|14|G|2027
4WSM|1|14|U|2028
4WSM|1|14|G|2029
4WSM|1|14|A|2030
4WSM|1|14|A|2031
4WSM|1|14|G|2032
4WSM|1|14|A|2033
4WSM|1|14|U|2034
4WSM|1|14|G|2035
4WSM|1|14|C|2036

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 29

50S ribosomal protein L3

Chain 95

50S ribosomal protein L21