HL_4WSM_197

3D structure

PDB id

4WSM (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Leu and mRNA with G-U mismatch in the first position in the A- and P-sites

Experimental method

X-RAY DIFFRACTION

Resolution

3.3 Å

Loop

Sequence

UGAAGAAG

Length

8 nucleotides

Bulged bases

4WSM|1|1H|G|2529

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WSM_197 not in the Motif Atlas

Homologous match to HL_7RQB_061

Geometric discrepancy: 0.0976

The information below is about HL_7RQB_061

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91104.1

Basepair signature

cWW-F

Number of instances in this motif group

12

Unit IDs

4WSM|1|1H|U|2528
4WSM|1|1H|G|2529
4WSM|1|1H|A|2530
4WSM|1|1H|A|2531
4WSM|1|1H|G|2532
4WSM|1|1H|A|2533
4WSM|1|1H|A|2534
4WSM|1|1H|G|2535

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 51

50S ribosomal protein L6