HL_4WT1_005

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GCUUUGC

Length

7 nucleotides

Bulged bases

4WT1|1|13|U|210

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_005 not in the Motif Atlas

Homologous match to HL_6CZR_076

Geometric discrepancy: 0.3302

The information below is about HL_6CZR_076

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_34168.3

Basepair signature

cWW-cWW-F

Number of instances in this motif group

11

Unit IDs

4WT1|1|13|G|200
4WT1|1|13|C|201
4WT1|1|13|U|208
4WT1|1|13|U|209
4WT1|1|13|U|210
4WT1|1|13|G|216
4WT1|1|13|C|217

Current chains

Chain 13

16S ribosomal RNA

Nearby chains