HL_4WT1_070

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

GCAAAUC

Length

7 nucleotides

Bulged bases

4WT1|1|14|C|1493, 4WT1|1|14|U|1497

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_070 not in the Motif Atlas

Homologous match to HL_7RQB_038

Geometric discrepancy: 0.1811

The information below is about HL_7RQB_038

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_46680.1

Basepair signature

cWW-F-F-F

Number of instances in this motif group

27

Unit IDs

4WT1|1|14|G|1492
4WT1|1|14|C|1493
4WT1|1|14|A|1494
4WT1|1|14|A|1495
4WT1|1|14|A|1496
4WT1|1|14|U|1497
4WT1|1|14|C|1498

Current chains

Chain 14

23S ribosomal RNA

Nearby chains

Chain 19

50S ribosomal protein L2