HL_4WT1_118
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- CGGUGAAAUG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT1_118 not in the Motif Atlas
- Homologous match to HL_4LFB_015
- Geometric discrepancy: 0.159
- The information below is about HL_4LFB_015
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- HL_75293.5
- Basepair signature
- cWW-F-F-F-F-F-F-F-F
- Number of instances in this motif group
- 11
Unit IDs
4WT1|1|1G|C|689
4WT1|1|1G|G|690
4WT1|1|1G|G|691
4WT1|1|1G|U|692
4WT1|1|1G|G|693
4WT1|1|1G|A|694
4WT1|1|1G|A|695
4WT1|1|1G|A|696
4WT1|1|1G|U|697
4WT1|1|1G|G|698
Current chains
- Chain 1G
- 16S ribosomal RNA
Nearby chains
- Chain 14
- Large subunit ribosomal RNA; LSU rRNA
- Chain 2A
- 30S ribosomal protein S11
- Chain 3L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 62
- 30S ribosomal protein S7
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