HL_4WT1_154

3D structure

PDB id

4WT1 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site

Experimental method

X-RAY DIFFRACTION

Resolution

3.05 Å

Loop

Sequence

CGUUGAG

Length

7 nucleotides

Bulged bases

4WT1|1|1H|U|614, 4WT1|1|1H|G|615

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT1_154 not in the Motif Atlas

Homologous match to HL_7A0S_019

Geometric discrepancy: 0.2864

The information below is about HL_7A0S_019

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_47787.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

10

Unit IDs

4WT1|1|1H|C|611
4WT1|1|1H|G|612
4WT1|1|1H|U|613
4WT1|1|1H|U|614
4WT1|1|1H|G|615
4WT1|1|1H|A|616
4WT1|1|1H|G|617

Current chains

Chain 1H

23S ribosomal RNA

Nearby chains

Chain 31

50S ribosomal protein L4