HL_4WT1_218
3D structure
- PDB id
- 4WT1 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Complex of 70S ribosome with tRNA-Phe and mRNA with A-A mismatch in the second position in the A-site
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.05 Å
Loop
- Sequence
- G(OMC)UCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- 4WT1|1|2L|U|34
- QA status
- Modified nucleotides: OMC
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT1_218 not in the Motif Atlas
- Homologous match to HL_5E81_212
- Geometric discrepancy: 0.109
- The information below is about HL_5E81_212
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.6
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 51
Unit IDs
4WT1|1|2L|G|32
4WT1|1|2L|OMC|33
4WT1|1|2L|U|34
4WT1|1|2L|C|35
4WT1|1|2L|A|36
4WT1|1|2L|U|37
4WT1|1|2L|A|38
4WT1|1|2L|A|39
4WT1|1|2L|C|40
Current chains
- Chain 2L
- tRNA-fMet
Nearby chains
- Chain 1G
- Small subunit ribosomal RNA; SSU rRNA
- Chain 3L
- Transfer RNA; tRNA
- Chain 4L
- mRNA
- Chain 82
- 30S ribosomal protein S9
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