HL_4WT8_007

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

UGAGAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_007 not in the Motif Atlas

Homologous match to HL_4LFB_007

Geometric discrepancy: 0.0837

The information below is about HL_4LFB_007

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4WT8|1|Ab|U|292
4WT8|1|Ab|G|293
4WT8|1|Ab|A|294
4WT8|1|Ab|G|295
4WT8|1|Ab|A|296
4WT8|1|Ab|G|297

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain AE

30S ribosomal protein S5

Chain AL

30S ribosomal protein S12

Chain AR

30S ribosomal protein S17