HL_4WT8_013

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CAGCCG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_013 not in the Motif Atlas

Geometric match to HL_5J7L_143

Geometric discrepancy: 0.235

The information below is about HL_5J7L_143

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_75660.5

Basepair signature

cWW-F

Number of instances in this motif group

19

Unit IDs

4WT8|1|Ab|C|506
4WT8|1|Ab|A|507
4WT8|1|Ab|G|508
4WT8|1|Ab|C|509
4WT8|1|Ab|C|510
4WT8|1|Ab|G|511

Current chains

Chain Ab

RNA (1504-MER)

Nearby chains

Chain A2

mRNA

Chain AL

30S ribosomal protein S12