HL_4WT8_028
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- CUGCAACCCG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT8_028 not in the Motif Atlas
- Homologous match to HL_4LFB_029
- Geometric discrepancy: 0.1334
- The information below is about HL_4LFB_029
- Detailed Annotation
- T-loop with 3 stacked bulged bases
- Broad Annotation
- T-loop
- Motif group
- HL_02887.3
- Basepair signature
- cWW-tWH-F-F-F-F-F-F
- Number of instances in this motif group
- 2
Unit IDs
4WT8|1|Ab|C|1296
4WT8|1|Ab|U|1297
4WT8|1|Ab|G|1298
4WT8|1|Ab|C|1299
4WT8|1|Ab|A|1300
4WT8|1|Ab|A|1301
4WT8|1|Ab|C|1302
4WT8|1|Ab|C|1303
4WT8|1|Ab|C|1304
4WT8|1|Ab|G|1305
Current chains
- Chain Ab
- RNA (1504-MER)
Nearby chains
- Chain AM
- 30S ribosomal protein S13
- Chain AN
- 30S ribosomal protein S14 type Z
- Chain AT
- 30S ribosomal protein S19
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