HL_4WT8_035

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCUUGG

Length

6 nucleotides

Bulged bases

4WT8|1|Bb|U|190, 4WT8|1|Bb|G|191

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_035 not in the Motif Atlas

Homologous match to HL_6CZR_075

Geometric discrepancy: 0.1793

The information below is about HL_6CZR_075

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_48417.4

Basepair signature

cWW-F-F

Number of instances in this motif group

28

Unit IDs

4WT8|1|Bb|C|187
4WT8|1|Bb|C|188
4WT8|1|Bb|U|189
4WT8|1|Bb|U|190
4WT8|1|Bb|G|191
4WT8|1|Bb|G|192

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BR

30S ribosomal protein S17

Chain BU

30S ribosomal protein S20