HL_4WT8_042

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUUCGG

Length

6 nucleotides

Bulged bases

4WT8|1|Bb|U|417

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_042 not in the Motif Atlas

Homologous match to HL_5J7L_011

Geometric discrepancy: 0.1361

The information below is about HL_5J7L_011

Detailed Annotation

UNCG

Broad Annotation

No text annotation

Motif group

HL_34617.5

Basepair signature

cWW-tSW-F

Number of instances in this motif group

57

Unit IDs

4WT8|1|Bb|C|415
4WT8|1|Bb|U|416
4WT8|1|Bb|U|417
4WT8|1|Bb|C|418
4WT8|1|Bb|G|419
4WT8|1|Bb|G|420

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BC

30S ribosomal protein S3

Chain BD

30S ribosomal protein S4