HL_4WT8_050

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUAACG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_050 not in the Motif Atlas

Homologous match to HL_4LFB_019

Geometric discrepancy: 0.1066

The information below is about HL_4LFB_019

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_34789.1

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

335

Unit IDs

4WT8|1|Bb|C|840
4WT8|1|Bb|U|841
4WT8|1|Bb|A|842
4WT8|1|Bb|A|843
4WT8|1|Bb|C|844
4WT8|1|Bb|G|845

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BE

30S ribosomal protein S5

Chain BH

30S ribosomal protein S8