HL_4WT8_051

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGCAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_051 not in the Motif Atlas

Homologous match to HL_4LFB_020

Geometric discrepancy: 0.06

The information below is about HL_4LFB_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4WT8|1|Bb|C|875
4WT8|1|Bb|G|876
4WT8|1|Bb|C|877
4WT8|1|Bb|A|878
4WT8|1|Bb|A|879
4WT8|1|Bb|G|880

Current chains

Chain Bb

RNA (1504-MER)

Nearby chains

Chain BR

30S ribosomal protein S17

Chain D1

Large subunit ribosomal RNA; LSU rRNA