HL_4WT8_075

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUUCGUGGAGC

Length

11 nucleotides

Bulged bases

4WT8|1|C1|G|412

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_075 not in the Motif Atlas

Homologous match to HL_7RQB_013

Geometric discrepancy: 0.1157

The information below is about HL_7RQB_013

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_91503.4

Basepair signature

cWW-F-F-F-F-F-F-F

Number of instances in this motif group

4

Unit IDs

4WT8|1|C1|G|408
4WT8|1|C1|U|409
4WT8|1|C1|U|410
4WT8|1|C1|C|411
4WT8|1|C1|G|412
4WT8|1|C1|U|413
4WT8|1|C1|G|414
4WT8|1|C1|G|415
4WT8|1|C1|A|416
4WT8|1|C1|G|417
4WT8|1|C1|C|418

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CH

50S ribosomal protein L28

Chain CO

50S ribosomal protein L15