HL_4WT8_088

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CCCACCAG

Length

8 nucleotides

Bulged bases

4WT8|1|C1|C|934

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_088 not in the Motif Atlas

Homologous match to HL_7RQB_026

Geometric discrepancy: 0.5304

The information below is about HL_7RQB_026

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_56241.1

Basepair signature

cWW-cSW-F

Number of instances in this motif group

15

Unit IDs

4WT8|1|C1|C|930
4WT8|1|C1|C|931
4WT8|1|C1|C|932
4WT8|1|C1|A|933
4WT8|1|C1|C|934
4WT8|1|C1|C|935
4WT8|1|C1|A|936
4WT8|1|C1|G|937

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain AM

30S ribosomal protein S13