HL_4WT8_097

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GUUAAUAUUC

Length

10 nucleotides

Bulged bases

4WT8|1|C1|U|1441, 4WT8|1|C1|U|1442

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_097 not in the Motif Atlas

Homologous match to HL_7RQB_036

Geometric discrepancy: 0.109

The information below is about HL_7RQB_036

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_69023.2

Basepair signature

cWW-tWH-F-F-F-F

Number of instances in this motif group

16

Unit IDs

4WT8|1|C1|G|1434
4WT8|1|C1|U|1435
4WT8|1|C1|U|1436
4WT8|1|C1|A|1437
4WT8|1|C1|A|1438
4WT8|1|C1|U|1439
4WT8|1|C1|A|1440
4WT8|1|C1|U|1441
4WT8|1|C1|U|1442
4WT8|1|C1|C|1443

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CX

50S ribosomal protein L23