HL_4WT8_102

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGACACAG

Length

8 nucleotides

Bulged bases

4WT8|1|C1|A|1659, 4WT8|1|C1|A|1661, 4WT8|1|C1|A|1663

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_102 not in the Motif Atlas

Homologous match to HL_7RQB_040

Geometric discrepancy: 0.1067

The information below is about HL_7RQB_040

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4WT8|1|C1|C|1657
4WT8|1|C1|G|1658
4WT8|1|C1|A|1659
4WT8|1|C1|C|1660
4WT8|1|C1|A|1661
4WT8|1|C1|C|1662
4WT8|1|C1|A|1663
4WT8|1|C1|G|1664

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain C8

50S ribosomal protein L34

Chain CW

50S ribosomal protein L22