HL_4WT8_105

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGUGAUGAGCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_105 not in the Motif Atlas

Geometric match to HL_2ZZM_002

Geometric discrepancy: 0.398

The information below is about HL_2ZZM_002

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_13963.3

Basepair signature

cWW-F-F

Number of instances in this motif group

4

Unit IDs

4WT8|1|C1|G|1762
4WT8|1|C1|G|1763
4WT8|1|C1|U|1764
4WT8|1|C1|G|1765
4WT8|1|C1|A|1766
4WT8|1|C1|U|1767
4WT8|1|C1|G|1768
4WT8|1|C1|A|1769
4WT8|1|C1|G|1770
4WT8|1|C1|C|1771
4WT8|1|C1|C|1772

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains