HL_4WT8_121

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUGUGGAAG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_121 not in the Motif Atlas

Homologous match to HL_7RQB_059

Geometric discrepancy: 0.0942

The information below is about HL_7RQB_059

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_40210.2

Basepair signature

cWW-tSH-F

Number of instances in this motif group

12

Unit IDs

4WT8|1|C1|C|2415
4WT8|1|C1|G|2416
4WT8|1|C1|U|2417
4WT8|1|C1|G|2418
4WT8|1|C1|U|2419
4WT8|1|C1|G|2420
4WT8|1|C1|G|2421
4WT8|1|C1|A|2422
4WT8|1|C1|A|2423
4WT8|1|C1|G|2424

Current chains

Chain C1

23S rRNA (2899-MER)

Nearby chains

Chain CH

50S ribosomal protein L28

Chain CO

50S ribosomal protein L15