3D structure

PDB id
4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
Description
Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
Experimental method
X-RAY DIFFRACTION
Resolution
3.4 Å

Loop

Sequence
CAGUCGGUAG
Length
10 nucleotides
Bulged bases
4WT8|1|C3|U|16, 4WT8|1|C3|C|17, 4WT8|1|C3|G|18, 4WT8|1|C3|G|19, 4WT8|1|C3|U|20
QA status
Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.
R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
R3DMCS Rfam
Detailed Annotation
No text annotation
Broad Annotation
No text annotation
Motif group
HL_07306.1
Basepair signature
cWW-F
Number of instances in this motif group
8

Unit IDs

4WT8|1|C3|C|13
4WT8|1|C3|A|14
4WT8|1|C3|G|15
4WT8|1|C3|U|16
4WT8|1|C3|C|17
4WT8|1|C3|G|18
4WT8|1|C3|G|19
4WT8|1|C3|U|20
4WT8|1|C3|A|21
4WT8|1|C3|G|22

Current chains

Chain C3
A site tNA, E site tNA

Nearby chains

Chain C1
Large subunit ribosomal RNA; LSU rRNA

Coloring options:

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