HL_4WT8_139
3D structure
- PDB id
- 4WT8 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 3.4 Å
Loop
- Sequence
- GCUCAUAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- HL_4WT8_139 not in the Motif Atlas
- Homologous match to HL_4WT8_216
- Geometric discrepancy: 0.1326
- The information below is about HL_4WT8_216
- Detailed Annotation
- tRNA anticodon loop
- Broad Annotation
- Anticodon loop
- Motif group
- HL_06059.5
- Basepair signature
- cWW-F-F-F-F-F-F-F
- Number of instances in this motif group
- 50
Unit IDs
4WT8|1|C4|G|32
4WT8|1|C4|C|33
4WT8|1|C4|U|34
4WT8|1|C4|C|35
4WT8|1|C4|A|36
4WT8|1|C4|U|37
4WT8|1|C4|A|38
4WT8|1|C4|A|39
4WT8|1|C4|C|40
Current chains
- Chain C4
- P site trNA
Nearby chains
- Chain A2
- mRNA
- Chain AI
- 30S ribosomal protein S9
- Chain AM
- 30S ribosomal protein S13
- Chain Ab
- Small subunit ribosomal RNA; SSU rRNA
- Chain C3
- Transfer RNA; tRNA
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