HL_4WT8_147

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GCUUGC

Length

6 nucleotides

Bulged bases

4WT8|1|D1|U|157, 4WT8|1|D1|U|158

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_147 not in the Motif Atlas

Homologous match to HL_7RQB_005

Geometric discrepancy: 0.3238

The information below is about HL_7RQB_005

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

4WT8|1|D1|G|153
4WT8|1|D1|C|154
4WT8|1|D1|U|157
4WT8|1|D1|U|158
4WT8|1|D1|G|159
4WT8|1|D1|C|160

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DH

50S ribosomal protein L28