HL_4WT8_162

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAAAC

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_162 not in the Motif Atlas

Homologous match to HL_4WF9_020

Geometric discrepancy: 0.0993

The information below is about HL_4WF9_020

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_37824.7

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

349

Unit IDs

4WT8|1|D1|G|653
4WT8|1|D1|G|654
4WT8|1|D1|A|655
4WT8|1|D1|A|656
4WT8|1|D1|A|657
4WT8|1|D1|C|658

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain D9

50S ribosomal protein L35

Chain DO

50S ribosomal protein L15