HL_4WT8_163

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGAACAG

Length

7 nucleotides

Bulged bases

4WT8|1|D1|C|669

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_163 not in the Motif Atlas

Homologous match to HL_7RQB_021

Geometric discrepancy: 0.3031

The information below is about HL_7RQB_021

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4WT8|1|D1|C|665
4WT8|1|D1|G|666
4WT8|1|D1|A|667
4WT8|1|D1|A|668
4WT8|1|D1|C|669
4WT8|1|D1|A|670
4WT8|1|D1|G|671

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain D7

50S ribosomal protein L33

Chain D9

50S ribosomal protein L35

Chain DO

50S ribosomal protein L15