HL_4WT8_170

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GGAACAAC

Length

8 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_170 not in the Motif Atlas

Homologous match to HL_7RQB_028

Geometric discrepancy: 0.1076

The information below is about HL_7RQB_028

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64430.2

Basepair signature

cWW-F-F-F

Number of instances in this motif group

13

Unit IDs

4WT8|1|D1|G|1023
4WT8|1|D1|G|1024
4WT8|1|D1|A|1025
4WT8|1|D1|A|1026
4WT8|1|D1|C|1027
4WT8|1|D1|A|1028
4WT8|1|D1|A|1029
4WT8|1|D1|C|1030

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DT

50S ribosomal protein L20