HL_4WT8_188

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CGUAAG

Length

6 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_188 not in the Motif Atlas

Homologous match to HL_7RQB_046

Geometric discrepancy: 0.1

The information below is about HL_7RQB_046

Detailed Annotation

GNRA

Broad Annotation

No text annotation

Motif group

HL_35490.2

Basepair signature

cWW-tSH-F-F

Number of instances in this motif group

299

Unit IDs

4WT8|1|D1|C|1836
4WT8|1|D1|G|1837
4WT8|1|D1|U|1838
4WT8|1|D1|A|1839
4WT8|1|D1|A|1840
4WT8|1|D1|G|1841

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DB

50S ribosomal protein L2

Chain DH

50S ribosomal protein L28