HL_4WT8_204

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

CUGUUCG

Length

7 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_204 not in the Motif Atlas

Homologous match to HL_4WF9_058

Geometric discrepancy: 0.1102

The information below is about HL_4WF9_058

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_30068.2

Basepair signature

cWW-F-F-F-F

Number of instances in this motif group

15

Unit IDs

4WT8|1|D1|C|2562
4WT8|1|D1|U|2563
4WT8|1|D1|G|2564
4WT8|1|D1|U|2565
4WT8|1|D1|U|2566
4WT8|1|D1|C|2567
4WT8|1|D1|G|2568

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DV

Transfer RNA; tRNA