HL_4WT8_210

3D structure

PDB id

4WT8 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal Structure of bactobolin A bound to 70S ribosome-tRNA complex

Experimental method

X-RAY DIFFRACTION

Resolution

3.4 Å

Loop

Sequence

GAAGACCAC

Length

9 nucleotides

Bulged bases

4WT8|1|D1|A|2829

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

HL_4WT8_210 not in the Motif Atlas

Homologous match to HL_7RQB_068

Geometric discrepancy: 0.0798

The information below is about HL_7RQB_068

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

HL_64690.1

Basepair signature

cWW-cSW-F-F-F-F

Number of instances in this motif group

9

Unit IDs

4WT8|1|D1|G|2828
4WT8|1|D1|A|2829
4WT8|1|D1|A|2830
4WT8|1|D1|G|2831
4WT8|1|D1|A|2832
4WT8|1|D1|C|2833
4WT8|1|D1|C|2834
4WT8|1|D1|A|2835
4WT8|1|D1|C|2836

Current chains

Chain D1

23S rRNA (2899-MER)

Nearby chains

Chain DC

50S ribosomal protein L3

Chain DQ

50S ribosomal protein L17

Chain DS

50S ribosomal protein L19